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Protonated DNA base pairs, particularly the Cytosine–Guanine–Cytosine (CGC) triple pairs, were investigated its relative energetics by theoretical calculations. The energetic stabilities of C+GC and CG+C are almost the same in the gas phase, although the C+G pair is more stable than CG+ by ca. 1150cm−1 (3.34kcal/mol). It is to be noted, however, that only C+GC was found in vivo, which seems to indicate...
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