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Recent developments in sequencing technology have allowed the investigation of the common disease/rare variant hypothesis. In the Genetic Analysis Workshop 17 data set, we have sequence data on both unrelated individuals and eight large extended pedigrees with simulated quantitative and qualitative phenotypes. Group 11, whose focus was incorporating linkage information, considered several different...
Model‐free linkage analysis methods, based on identity‐by‐descent allele sharing, are commonly used for complex trait analysis. The Maximum‐Likelihood‐Binomial (MLB) approach, which is based on the hypothesis that parental alleles are binomially distributed among affected sibs, is particularly popular. An extension of this method to quantitative traits (QT) has been proposed (MLB‐QTL), based on the...
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