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FPGA-based accelerators are becoming first class citizens in data centers. Adding FPGAs in data centers can lead to higher compute densities with improved energy efficiency for latency critical workloads, such as financial applications. However FPGA deployment in datacenters brings difficulties both to application developers, and cloud providers. Application writers need to deal with the interfacing...
With the advent of next generation sequencing technologies, the cost of sequencing whole genomes is poised to go below $1000 per human individual in a few years. As more and more genomes are sequenced, analysis methods are undergoing rapid development, making it tempting to store sequencing data for long periods of time so that the data can be re-analyzed with the latest techniques. The challenging...
Background The impressively low cost and improved quality of genome sequencing provides to researchers of genetic diseases, such as cancer, a powerful tool to better understand the underlying genetic mechanisms of those diseases and treat them with effective targeted therapies. Thus, a number of projects today sequence the DNA of large patient populations each of which produces at least hundreds of...
More fundamental than IP lookups and packet classification in routers is the extraction of fields such as IP Dest and TCP Ports that determine packet forwarding. While parsing of packet fields used to be easy, new shim layers (e.g., MPLS, 802.1Q, MAC-in-MAC) of possibly variable length have greatly increased the worst-case path in the parse tree. The problem is exacerbated by the need to accommodate...
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